PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02206g05018.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 211aa    MW: 24443.2 Da    PI: 9.581
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02206g05018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.74.9e-1455101455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                h ++Er+RR+++ ++f eL  llP +     kK++Ka+iLe+A++++k+Lq
  Peinf101Scf02206g05018.1  55 DHIIAERKRREKLSQRFVELSALLPGL-----KKVDKASILEQAIKCVKELQ 101
                               699************************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.72351100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.6E-1155101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.2E-1655114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.40E-1256105No hitNo description
SuperFamilySSF474598.9E-1756120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-1357106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MNNVINVNSV PKAVKLNPWM RIRIYFFPYV KSKSFNDQED NKDRKIKIPS VDHQDHIIAE  60
RKRREKLSQR FVELSALLPG LKKVDKASIL EQAIKCVKEL QEKVQLLEEQ KKTSRSIMFV  120
NKSQLEEEDD NYSSSDEINS HGSIITDDIP LDIKARFSDK NVLITITCAR RTAFLMKMYD  180
EIEKLHLTIV NSSMMPFGKH ANHVTIVAQV N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15964ERKRRE
26065RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015065347.12e-65transcription factor bHLH25-like
TrEMBLA0A2G3D8F65e-67A0A2G3D8F6_CAPCH; Uncharacterized protein
STRINGPGSC0003DMT4000786964e-63(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA136021316
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-31bHLH family protein