PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02318g08025.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family TALE
Protein Properties Length: 658aa    MW: 73033.8 Da    PI: 5.4955
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02318g08025.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.42.8e-094294661954
                               HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                  Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                               Fe   ++yp+ +++  LA+++gLt +qV++WF N R +
  Peinf101Scf02318g08025.1 429 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 466
                               664459******************************88 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005747.6E-61213360IPR006563POX domain
PfamPF075261.4E-50219358IPR006563POX domain
PROSITE profilePS5007112.163407470IPR001356Homeobox domain
SMARTSM003891.0E-9410474IPR001356Homeobox domain
CDDcd000861.46E-12410471No hitNo description
SuperFamilySSF466892.44E-17411477IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.8E-29413476IPR009057Homeodomain-like
PfamPF059204.4E-18427466IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 658 aa     Download sequence    Send to blast
MATYFPSPNN QRDAGTFQYL RPLPGSYSEA PNAQENMMMF MNYSSSGSYS DMLTGTSQQQ  60
NSCIDISPVG ASDSNTSQQE ILSNLGGSRI EMHDFSAWKD SRNEMLAMHS MGAPDSVIQV  120
AQNVQGQGLS LSLGSNIPSG IGFSHVQCQN PNQGFMSFLT PTSSIPGEGS GGNVSYGGDD  180
NSHPKQQRNA DYMSPGYPGS NSDATKGHVY NTTSITRAIP NSKYLKAAQY LLDEVVNVRK  240
AIKEHNSKKE LIKDTKEFDG DSKNKSSDPP AEGSSNPQES NSNHSELSTT EKQEVQNKLT  300
KLLSMLDEID RRYRQYYHQM QIVVSSFDVV AGDGAAKPYT ALALQTISRH FRCLRDAICD  360
QIRASRKSLG EQDASENSRV VGISRLRYVD QHIRQQRALQ QLGMMQQHAW RPQRGLPESS  420
VSILRAWLFE HFLHPYPKDS DKIMLARQTG LTRSQVSNWF INARVRLWKP MVEEMYKEEA  480
GDVEMDSNSS SEVAPRLATK DSKVEEREDL QQNATSEFGG QILESKSNHA ADIEMEGANK  540
AETQSQSGME NQRDEPRHAM DNCTMFDTFV QGNDRFSEFG RFGSGNVLQS GVSLTLGLQQ  600
GEGSNLPMSI ESHVSYVPVR ADDMYSTAPT TMVPETAEFN CLDSGNRQHP FWLLPSAT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A4e-16416474563Homeobox protein Meis2
3k2a_B4e-16416474563Homeobox protein Meis2
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6863790.0EU686379.1 Solanum etuberosum BEL30 protein mRNA, complete cds.
GenBankEU6863830.0EU686383.1 Solanum palustre BEL30 protein mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016539788.10.0PREDICTED: BEL1-like homeodomain protein 6
TrEMBLA0A1U8DXN40.0A0A1U8DXN4_CAPAN; BEL1-like homeodomain protein 7
TrEMBLA0A2G2XWS00.0A0A2G2XWS0_CAPAN; BEL1-like homeodomain protein 6
STRINGXP_009757871.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA102052226
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34610.21e-135BEL1-like homeodomain 6