PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02318g10038.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 419aa    MW: 47060.6 Da    PI: 5.5325
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02318g10038.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.8e-09224271455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Peinf101Scf02318g10038.1 224 SHSLAERVRREKISERMRFLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 271
                               8**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.08E-10218275No hitNo description
SuperFamilySSF474591.44E-16218287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.485220270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-16220287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-6224271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-8226276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009637Biological Processresponse to blue light
GO:0009911Biological Processpositive regulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
MLHITGNVAN GNSEMSVLER QRARMKWQQE EFQQQEMLSY FDGQNDFMNS LTLSAEAQQF  60
HGLTNVNDQS LNEIVTRAIK PDPCLENNWG EFGAIGTDGF GYVPVGVGHG EMSHTTDMNY  120
ATDVKETVLS SNRGRENFKK RKADKNQQVK DVAEEETKVK KMKESIEEGD SKVSTEGNNN  180
KRSKSNSTNS KETSDTSKEK SKITEDKKPD YIHVRARRGQ ATDSHSLAER VRREKISERM  240
RFLQDLVPGC NKITGKAGML DEIINYVQSL QRQVEFLSMK LAAVNPRLDI DIDNFFNKEI  300
IAASTSNFPT VGAGTSSEML SLAHRQLNSL QQIVSSSGLD MGILNLSEMA LRRSTSTPVS  360
IPETFLDSSS INQVQSFQPW DTELSNLYAM ELQQGRSVQF LPHQFTGFVE AGNDLKMEM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016433673.10.0PREDICTED: transcription factor bHLH63-like isoform X1
TrEMBLA0A2G3BVW20.0A0A2G3BVW2_CAPCH; Uncharacterized protein
STRINGXP_009762311.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA65382330
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.12e-59cryptochrome-interacting basic-helix-loop-helix 1