PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02382g01033.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 188aa    MW: 21184.8 Da    PI: 5.3634
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02382g01033.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.82.4e-081453141
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41
                              +g+W++ Ed+ll +++k++G g+W++ +++   +   kq+k
  Peinf101Scf02382g01033.1 14 KGPWSAKEDLLLTNYIKEHGEGQWRSLPNKAD-KPRKKQVK 53
                              79************************999988.33446666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-11561IPR009057Homeodomain-like
SuperFamilySSF466891.42E-7952IPR009057Homeodomain-like
PROSITE profilePS5129410.312964IPR017930Myb domain
PfamPF002492.1E-61455IPR001005SANT/Myb domain
CDDcd001674.34E-41643No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MGRAPCCAKE GLRKGPWSAK EDLLLTNYIK EHGEGQWRSL PNKADKPRKK QVKKKKNKKI  60
KDQPLVQDTS EPPQVVFIPK PIRISSGHSR NYSVDQNVAL STSSSNSADN NNNISNNEGK  120
QAEVSFDPLF DEVVLDGCCE LSPEWSLPTD DSMLEKVYEE YLQLISEECF LQLDDPLAEN  180
ASHHPMLM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019261444.17e-24PREDICTED: myb-related protein 308-like
STRINGSolyc08g008480.2.13e-20(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28110.12e-14myb domain protein 41