PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02382g03038.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 355aa    MW: 40136.2 Da    PI: 5.5574
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02382g03038.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY894.1e-28133193259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                               dDgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs++dp+v+eitY+g H+++
  Peinf101Scf02382g03038.1 133 DDGYSWRKYGQKDILGAKYPRSYYRCTYRhmqNCWTTKQVQRSDDDPTVFEITYKGYHTCH 193
                               8**************************99899***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.7E-27125194IPR003657WRKY domain
SuperFamilySSF1182908.37E-25131194IPR003657WRKY domain
SMARTSM007742.5E-38132194IPR003657WRKY domain
PROSITE profilePS5081121.092133190IPR003657WRKY domain
PfamPF031063.1E-25133193IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MDCAFNWEYK SLINELTQGM EQTKQLRAYL SSVASSSETQ ELFLQKILSS FEQSLSILKW  60
SGSVAQSSRS LPPTSGTIES SVSVDGSPTS DNKKRSFQDH QEIIDISKKR KSQPTWTEQV  120
KVSADTGFEG PTDDGYSWRK YGQKDILGAK YPRSYYRCTY RHMQNCWTTK QVQRSDDDPT  180
VFEITYKGYH TCHQATNSAL QVTSPQKQEL KKETNHQIGQ ANQVLMNLRA NLRVDTNDLD  240
KNETAICPFS FPPTFSSLTD ENRHFHISHV DDNLIGGYSP SFVSPTTPES NYFSISSSQM  300
NGFGMVQNLH HSESDLSDIF STNTSTTSSP MVGDFSLDHF ELDPNFPFDN PTFFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A8e-19133192968OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
192110KKRSFQDHQEIIDISKKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019233122.10.0PREDICTED: probable WRKY transcription factor 53
TrEMBLA0A1J6KDX00.0A0A1J6KDX0_NICAT; Putative wrky transcription factor 53
STRINGXP_009768979.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18432467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.19e-63WRKY family protein