PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02382g03051.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 296aa    MW: 32490.3 Da    PI: 7.4705
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02382g03051.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.32.3e-26158217258
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                               dDgy+WrKYG K++ gs++prsYYrC+++   +C++ k+ +rs++dp+v+ei+Y+g+H++
  Peinf101Scf02382g03051.1 158 DDGYSWRKYGLKDILGSTYPRSYYRCAYRhmqNCRAMKQAQRSDDDPTVFEIIYKGDHTC 217
                               8**************************99889**************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-25155219IPR003657WRKY domain
SuperFamilySSF1182903.53E-23156219IPR003657WRKY domain
SMARTSM007741.7E-35157219IPR003657WRKY domain
PROSITE profilePS5081119.887157215IPR003657WRKY domain
PfamPF031062.6E-24158217IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MDCAFNWEYK TVVLINELTQ GIKHTKQLRA YLSSVASTSL ESTQELLLQK ILSSNERSLL  60
ILKGSTSGSA SQSLHPLPPP SVSSGSASQS LHPLPPPSVV IESPVSVDGS PTSDNKKRSF  120
NDQSELIDFP KRSRKSRPTG TELVRVSAES PGFECPIDDG YSWRKYGLKD ILGSTYPRSY  180
YRCAYRHMQN CRAMKQAQRS DDDPTVFEII YKGDHTCGQV TKSPSFVCPN ITESSCQMFG  240
IGTESYLTDI GAVLNLHHSE SDHTNMFSAN TSTTSSSNMV GDFTTSLGAT SKFRTC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-18157217868OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009768979.12e-90PREDICTED: probable WRKY transcription factor 53
RefseqXP_016508373.12e-90PREDICTED: probable WRKY transcription factor 53
TrEMBLA0A1S4D4V35e-89A0A1S4D4V3_TOBAC; probable WRKY transcription factor 53
TrEMBLA0A1U7W2Y35e-89A0A1U7W2Y3_NICSY; probable WRKY transcription factor 53
STRINGXP_009768979.18e-90(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2505222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.12e-38WRKY family protein