PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02569g01004.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family G2-like
Protein Properties Length: 406aa    MW: 45222.1 Da    PI: 7.1525
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02569g01004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.74.7e-32228281255
                   G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                               pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Peinf101Scf02569g01004.1 228 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 281
                               9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.15E-15225281IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.9E-28226281IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-23228281IPR006447Myb domain, plants
PfamPF002492.2E-7229280IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MPLEGVFVQT PSSSKQIPDL SLHISPPNSS STSSSCNSIS ELLAANCELS LAHPTTINEE  60
NNLFYGLEKR SFTRNPLAPQ NNYMFQPSYN QMNHTNNHGV SSLLEDVSSD GLRPIKGIPI  120
YHQNGSFPFL GLEYSTSREK DPKRCFYPTS SSNTSSSTLC SPFFNGASTL DHLSSTLPYR  180
IPVTNRFHHQ QNNFGVGLGP THHEVSSHSM MRSRFLPKFP ARRSMRAPRM RWTTSLHARF  240
VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR TVKTTDKPAA SSGQSDGSGE  300
EDLLAIDRLL DQRGPSDGSD DPSTTTPTLW SNSSSSTRER WSQANFNDTN GLIRSSSFPS  360
QQRSSHQIEE CDYSRPLSYG GCSLDQKNPS LEFTLGRPDW VEKEHD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-17229283458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-17229283458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-17229283357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-17229283357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-17229283357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-17229283357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-17229283458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-17229283458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-17229283458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-17229283458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-17229283458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-17229283458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2395838e-35AC239583.2 Solanum lycopersicum cultivar Heinz 1706 chromosome 5 clone C05HBa0201O22, complete sequence.
GenBankHG9754448e-35HG975444.1 Solanum pennellii chromosome ch05, complete genome.
GenBankHG9755178e-35HG975517.1 Solanum lycopersicum chromosome ch05, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019245434.10.0PREDICTED: transcription repressor KAN1-like isoform X4
TrEMBLA0A1J6IDL20.0A0A1J6IDL2_NICAT; Transcription repressor kan1
STRINGXP_009784257.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24682355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.16e-41G2-like family protein