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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Peinf101Scf02633g05002.1 | ||||||||
| Common Name | AN2 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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| Family | MYB_related | ||||||||
| Protein Properties | Length: 132aa MW: 14715 Da PI: 3.8919 | ||||||||
| Description | MYB_related family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 29.9 | 1.3e-09 | 13 | 42 | 1 | 30 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30
+g+WT+eEd+ll ++++++G g W++++ +
Peinf101Scf02633g05002.1 13 KGAWTEEEDLLLRECIEKYGEGKWHLVPVR 42
79************************9866 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS51294 | 9.391 | 8 | 52 | IPR017930 | Myb domain |
| Gene3D | G3DSA:1.10.10.60 | 4.9E-11 | 8 | 42 | IPR009057 | Homeodomain-like |
| SuperFamily | SSF46689 | 7.9E-8 | 10 | 41 | IPR009057 | Homeodomain-like |
| SMART | SM00717 | 0.0023 | 12 | 62 | IPR001005 | SANT/Myb domain |
| Pfam | PF00249 | 5.1E-8 | 13 | 40 | IPR001005 | SANT/Myb domain |
| CDD | cd00167 | 3.08E-6 | 15 | 39 | No hit | No description |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 132 aa Download sequence Send to blast |
MSTSNASTSG VRKGAWTEEE DLLLRECIEK YGEGKWHLVP VRADKNEGDT EIIKFSDEKQ 60 KPEESIDDGL QWWANLLANN IEIEELVSYN SPTLLHEETA PSVNAESSLT QEGGSGLSDF 120 SVDIDDIWDL LS |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Nucleotide ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | |||
| GenBank | EF423835 | 1e-149 | EF423835.1 Petunia integrifolia subsp. inflata strain S6 anthocyanin 2 (AN2) gene, complete cds. | |||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| TrEMBL | A0A3G8FWW5 | 1e-53 | A0A3G8FWW5_PETIN; MYB transcription factor AN2 | ||||
| TrEMBL | A4GRU5 | 1e-53 | A4GRU5_PETIN; Anthocyanin 2 | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Asterids | OGEA12 | 24 | 2154 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G56650.1 | 5e-16 | production of anthocyanin pigment 1 | ||||
| Publications ? help Back to Top | |||
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