PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf02665g00004.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

ERF

Protein Properties

Length: 232aa MW: 25999.9 Da PI: 9.0953

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf02665g00004.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.5	5.2e-16	111	161	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y GVr+++ +g ++AeIr p k +r +lg++ t+e+Aa a+++a+ k++g Peinf101Scf02665g00004.1 111 RYIGVRRRR-WGTFAAEIRNP---DrKGARLWLGTYETPEDAALAYDEAAFKIRG 161 699*777.******8...3245***********************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00847	7.8E-12	111	161	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	2.8E-29	111	170	IPR001471	AP2/ERF domain
SMART	SM00380	3.4E-32	111	175	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	7.85E-21	111	170	IPR016177	DNA-binding domain
PROSITE profile	PS51032	22.576	111	169	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.2E-10	112	123	IPR001471	AP2/ERF domain
CDD	cd00018	3.02E-23	120	171	No hit	No description
PRINTS	PR00367	1.2E-10	151	171	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence Send to blast
MKMNNPADHE SFSFSDLNFL ESIKQHLLND SDFSDMFSPT SSSNDAWLNS PSSSFGSCLS 60 ATKSFESYIV KENFEEKTLT NLDISIEKSE SEEETGDVVA REGNAPQDWR RYIGVRRRRW 120 GTFAAEIRNP DRKGARLWLG TYETPEDAAL AYDEAAFKIR GSKARLNFPH LIGSNMPKPA 180 RVTSRHSRVR SPEPASSSSS STSSQNTGKR KSKIDVINSI AKAKCFGITV RW

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1gcc_A	2e-23	110	169	1	60	ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Acts as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269\|PubMed:10652129, ECO:0000269\|PubMed:10792818, ECO:0000269\|PubMed:7756828, ECO:0000269\|Ref.2}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269\|PubMed:10652129, ECO:0000269\|PubMed:12090623, ECO:0000269\|PubMed:7756828, ECO:0000269\|Ref.2}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009781921.1	7e-92	PREDICTED: ethylene-responsive transcription factor 2-like
Refseq	XP_016481012.1	7e-92	PREDICTED: ethylene-responsive transcription factor 2-like
Swissprot	Q40479	3e-37	ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBL	A0A1S4AWL1	2e-90	A0A1S4AWL1_TOBAC; ethylene-responsive transcription factor 2-like
TrEMBL	A0A1U7WX89	2e-90	A0A1U7WX89_NICSY; ethylene-responsive transcription factor 2-like
STRING	XP_009781921.1	3e-91	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA21	24	1165

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44840.1	5e-32	ethylene-responsive element binding factor 13

Publications ? help Back to Top
Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells. Plant Cell Physiol., 2006. 47(4): p. 554-8 [PMID:16452120]