PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02665g00005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 207aa    MW: 23186.8 Da    PI: 9.8432
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02665g00005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.71.8e-1585135255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                               +y GVr+++ +g ++AeIrdp   + k +r +lg++ t ++Aa a+++a+ k++g
  Peinf101Scf02665g00005.1  85 RYIGVRRRR-WGTFAAEIRDP---NrKGARLWLGTYETSKDAALAYDQAAFKIRG 135
                               699***777.**********9...6566*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.0E-3185149IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.8E-2985144IPR001471AP2/ERF domain
PROSITE profilePS5103222.31385143IPR001471AP2/ERF domain
PfamPF008471.5E-1185135IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-2085144IPR016177DNA-binding domain
PRINTSPR003679.4E-118697IPR001471AP2/ERF domain
CDDcd000182.13E-2294145No hitNo description
PRINTSPR003679.4E-11125145IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MSPADDNTFS LSEFDLLESI TQHLLNDSHF SEILTPVTSS NIIALPNSTP ASSFDHSSSE  60
QNSFESHEKS DSEEQTKGPP QHWRRYIGVR RRRWGTFAAE IRDPNRKGAR LWLGTYETSK  120
DAALAYDQAA FKIRGSKARL NFPHLIGSSN IAKPARVTSR RSSEPASSSD SSLSLHNEGT  180
RKRKLDMINS IAKARVFCHN LNLQMLV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-2586149669ATERF1
3gcc_A7e-2586149669ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019241433.19e-77PREDICTED: ethylene-responsive transcription factor 2-like
TrEMBLA0A1J6JNR92e-75A0A1J6JNR9_NICAT; Ethylene-responsive transcription factor 13
STRINGXP_009781921.12e-72(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.18e-29ethylene-responsive element binding factor 13