PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf02685g00016.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 475aa MW: 52918.8 Da PI: 5.8126

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf02685g00016.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.5	1.3e-09	294	341	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ah+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Peinf101Scf02685g00016.1 294 AHSLAERVRREKISERMKLLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 341 8***********************9....677***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	2.62E-17	288	360	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	9.24E-11	288	345	No hit	No description
PROSITE profile	PS50888	15.682	290	340	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.6E-17	290	358	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.2E-6	294	341	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	3.2E-11	296	346	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence Send to blast
MDKGNLFMHD GNTTMSGYGL EMQSNELQHC FFNPNWDNST TIDQNNDPFE SALSSMVSSP 60 AASNANMPNA STTNNDNFVL RELIGRLGSI CNSREMSPNS YMHNASTNST NNSCYTTPLN 120 SPPKLNLSMM EHHQMRGNLP NHQLPQFSAD PGFAERAARL SCFANKTFNE SELLQNSRQL 180 GLNLEPGKLS RVSSNQSIKV LTGSQLGVQE FKDGNHSAPK NSELGDSREN SSVSEQIPVG 240 EINAKRSKSE ENNESDKDSG KAKEEENKDN QKPLPEAPKD YIHVRARRGQ ATDAHSLAER 300 VRREKISERM KLLQDLVPGC NKVTGKAVML DEIINYVQSL QRQVEFLSMK LATVNPRMDF 360 NMEALLSKDM FQSRGSLSQN MYPSENSAQP FPYGFQSQPG QNFHKGAEIP FPINPMNPNL 420 ARNANMQLPS LDGFVEQTPQ VPTFFEDDLH SVVQMGFGQN QNQSNTPTSQ MKVEL

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence Send to blast

MDKGNLFMHD GNTTMSGYGL EMQSNELQHC FFNPNWDNST TIDQNNDPFE SALSSMVSSP  60
AASNANMPNA STTNNDNFVL RELIGRLGSI CNSREMSPNS YMHNASTNST NNSCYTTPLN  120
SPPKLNLSMM EHHQMRGNLP NHQLPQFSAD PGFAERAARL SCFANKTFNE SELLQNSRQL  180
GLNLEPGKLS RVSSNQSIKV LTGSQLGVQE FKDGNHSAPK NSELGDSREN SSVSEQIPVG  240
EINAKRSKSE ENNESDKDSG KAKEEENKDN QKPLPEAPKD YIHVRARRGQ ATDAHSLAER  300
VRREKISERM KLLQDLVPGC NKVTGKAVML DEIINYVQSL QRQVEFLSMK LATVNPRMDF  360
NMEALLSKDM FQSRGSLSQN MYPSENSAQP FPYGFQSQPG QNFHKGAEIP FPINPMNPNL  420
ARNANMQLPS LDGFVEQTPQ VPTFFEDDLH SVVQMGFGQN QNQSNTPTSQ MKVEL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019253766.1	0.0	PREDICTED: transcription factor bHLH62-like
TrEMBL	A0A1J6IEQ5	0.0	A0A1J6IEQ5_NICAT; Transcription factor bhlh62
STRING	XP_009627868.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1057	23	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	5e-83	bHLH family protein