PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf02757g03066.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 374aa MW: 41684.8 Da PI: 6.8256

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf02757g03066.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.4	0.0003	310	346	14	55
HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ +++ +L +l+ + +K + a++L +A+ YI+ Lq Peinf101Scf02757g03066.1 310 EKLGDRITTLHQLVSPF-----GKTDTASVLSEAIGYIRFLQ 346 56778889999999887.....8******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	11.204	296	345	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	5.89E-10	308	356	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.32E-6	308	350	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.4E-7	310	353	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence Send to blast
MASGNPTNWW NNMMLNGNMH PPHESHQQLS SSSSLQHFYG SSNFLADNPS QDVPSRSWSQ 60 LLLSGLSSDQ EKSGMSHFHQ YRKLENWEDQ SLNSIQQYPL SSSFRVPVVD VKPEFVGQMY 120 GNYHHQDLPA VSSSPANSCV TTTLNFSCNN KSNKVEAKHQ HPDHSSELSS SSSLQHFYGS 180 SNFLADNPSQ DVPSRSWSQL LLSGLSSDQE KSGMSHFHQY RKLENWEDQS LNSIQQYPLS 240 SSFRVPVVDV KPEFVGQMYG NYHHQDLPAV SSSPANSCVT TTLNFSCNNK SNKVEAKHQH 300 PDHSSEVRKE KLGDRITTLH QLVSPFGKTD TASVLSEAIG YIRFLQAQIQ ALSSPYLGNV 360 AGSMGHTHQQ SVSI

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence Send to blast

MASGNPTNWW NNMMLNGNMH PPHESHQQLS SSSSLQHFYG SSNFLADNPS QDVPSRSWSQ  60
LLLSGLSSDQ EKSGMSHFHQ YRKLENWEDQ SLNSIQQYPL SSSFRVPVVD VKPEFVGQMY  120
GNYHHQDLPA VSSSPANSCV TTTLNFSCNN KSNKVEAKHQ HPDHSSELSS SSSLQHFYGS  180
SNFLADNPSQ DVPSRSWSQL LLSGLSSDQE KSGMSHFHQY RKLENWEDQS LNSIQQYPLS  240
SSFRVPVVDV KPEFVGQMYG NYHHQDLPAV SSSPANSCVT TTLNFSCNNK SNKVEAKHQH  300
PDHSSEVRKE KLGDRITTLH QLVSPFGKTD TASVLSEAIG YIRFLQAQIQ ALSSPYLGNV  360
AGSMGHTHQQ SVSI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019224898.1	1e-92	PREDICTED: transcription factor bHLH68-like isoform X2
TrEMBL	A0A314KWA3	6e-91	A0A314KWA3_NICAT; Transcription factor bhlh68
STRING	XP_009628050.1	5e-91	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1519	22	47

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	3e-27	bHLH family protein