PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02877g01017.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 67aa    MW: 7940.27 Da    PI: 10.7893
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02877g01017.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY29.31.7e-094667122
                              ---SS-EEEEEEE--TT-SS-E CS
                      WRKY  1 ldDgynWrKYGqKevkgsefpr 22
                              ldDgy+WrKYG+K+vk++++ r
  Peinf101Scf02877g01017.1 46 LDDGYKWRKYGKKKVKSNTNLR 67
                              59***************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-93267IPR003657WRKY domain
SuperFamilySSF1182901.18E-73966IPR003657WRKY domain
PROSITE profilePS5081110.94167IPR003657WRKY domain
PfamPF031061.5E-54767IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    Send to blast
MQEISSTTPP NIYLKEKSKV GIKKDKIMNE RHDAIAFRTK TRLEILDDGY KWRKYGKKKV  60
KSNTNLR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754511e-35HG975451.1 Solanum pennellii chromosome ch12, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009763636.14e-22PREDICTED: probable WRKY transcription factor 51
RefseqXP_016482352.14e-22PREDICTED: probable WRKY transcription factor 51
TrEMBLA0A1S4B0881e-20A0A1S4B088_TOBAC; probable WRKY transcription factor 51
TrEMBLA0A1U7VFG71e-20A0A1U7VFG7_NICSY; probable WRKY transcription factor 51
STRINGXP_009763636.12e-21(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA141921013