PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf03438g00016.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

ZF-HD

Protein Properties

Length: 83aa MW: 9191.24 Da PI: 8.4981

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf03438g00016.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	101.2	7.1e-32	22	75	2	59
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 ++vrY eC+kNhAas+Gg++vDGC+Efmps t+ +l+CaACgCHRnFHR+eve+ Peinf101Scf03438g00016.1 22 RTVRYVECQKNHAASVGGYVVDGCREFMPS----ETPGTLTCAACGCHRNFHRKEVES 75 579************************9....4689***************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04770	6.1E-28	24	73	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDom	PD125774	2.0E-19	24	81	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMs	TIGR01566	2.3E-26	25	73	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	24.167	26	72	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 83 aa Download sequence Send to blast
MKKVLRRNDS SRNSTNSSFT ARTVRYVECQ KNHAASVGGY VVDGCREFMP SETPGTLTCA 60 ACGCHRNFHR KEVESDVASD YGI

Functional Description ? help Back to Top
Source	Description
UniProt	Inhibits zinc finger homeodomain (ZHD) transcription factors by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by regulating the expression of specific genes. Promotes the formation of ectopic shoot meristems on leaf margins. {ECO:0000269\|PubMed:21455630}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001234189.1	2e-43	mini zinc finger protein
Swissprot	Q2Q493	7e-27	MIF3_ARATH; Mini zinc finger protein 3
TrEMBL	A0A2G2V060	9e-46	A0A2G2V060_CAPBA; Mini zinc finger protein 1
TrEMBL	A0A2G3ACA2	9e-46	A0A2G3ACA2_CAPAN; Mini zinc finger protein 1
TrEMBL	A0A2G3D9P7	9e-46	A0A2G3D9P7_CAPCH; Mini zinc finger protein 1
STRING	Solyc02g087970.1.1	7e-43	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1105	24	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18835.1	1e-28	mini zinc finger