PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03511g00011.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 155aa    MW: 17554.2 Da    PI: 6.9581
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03511g00011.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.34.3e-1144129694
                               ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.S CS
                        B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.s 88 
                               t+  v  +  ++lp+k  +e   ++++     + +   + We+++ y  +s++ +  + Wk+F+++n+Lk+gD +vF+l+    s
  Peinf101Scf03511g00011.1  44 TKTAVKPHYSMYLPRKMSKEL--PPAGA--PAVLTYGRKNWEMNF-YGANSNGKFSPTEWKKFADDNNLKVGDGLVFELSeCGtS 123
                               555666677788999987666..23332..3455678899*****.877778878899********************9842224 PP

                               EE..EE CS
                        B3  89 efelvv 94 
                               + +++v
  Peinf101Scf03511g00011.1 124 KIHFKV 129
                               444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019362.55E-1435133IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.5E-1236133IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.05339135IPR003340B3 DNA binding domain
CDDcd100173.21E-1542133No hitNo description
SMARTSM010193.1E-643135IPR003340B3 DNA binding domain
PfamPF023627.4E-1043129IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
LLRDPLILFQ SMKMPGYESS GIKEIDEGLY WPLSGKPYVD MILTKTAVKP HYSMYLPRKM  60
SKELPPAGAP AVLTYGRKNW EMNFYGANSN GKFSPTEWKK FADDNNLKVG DGLVFELSEC  120
GTSKIHFKVM ILRGDFPSEL LPEEEGATHD HPIRI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009630412.13e-70PREDICTED: B3 domain-containing protein Os04g0386900-like
RefseqXP_009786634.15e-70PREDICTED: B3 domain-containing protein Os04g0386900-like
RefseqXP_016490571.15e-70PREDICTED: B3 domain-containing protein Os04g0386900-like
RefseqXP_016515131.13e-70PREDICTED: B3 domain-containing protein Os04g0386900-like
TrEMBLA0A1S4BNV11e-68A0A1S4BNV1_TOBAC; B3 domain-containing protein Os04g0386900-like
TrEMBLA0A1S4DNX07e-69A0A1S4DNX0_TOBAC; B3 domain-containing protein Os04g0386900-like
TrEMBLA0A1U7XI631e-68A0A1U7XI63_NICSY; B3 domain-containing protein Os04g0386900-like
STRINGXP_009786634.12e-69(Nicotiana sylvestris)
STRINGXP_009630412.11e-69(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18192154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-10B3 family protein