PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03618g00005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Trihelix
Protein Properties Length: 389aa    MW: 42698.4 Da    PI: 10.2383
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03618g00005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.89.1e-1683170186
                  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 
                               +W++  + +Li+a  e+  +l+rg+lk+++W+ev++ +      r++ ++ +qCk++++ ++k+yk +k+  + +  +  s++p+
  Peinf101Scf03618g00005.1  83 CWSEGATGVLIDAWGERYMELSRGNLKQKHWKEVADIVssreDYRKVAKTDIQCKNRIDTVKKKYKLEKAKIGAG--QGPSKWPF 165
                               7*************************************8766667888999**********************98..56668*** PP

                  trihelix  82 fdqle 86 
                               f++l+
  Peinf101Scf03618g00005.1 166 FEKLD 170
                               ***98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138378.7E-2681172No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0010431Biological Processseed maturation
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MEHDDETQSH DSEGSRSPVD SPRSNGRITV TVAAGPPHQN TLTLALPIQQ QLHQQQQHQS  60
RSITTSVGGS GGSGGGGGGR EDCWSEGATG VLIDAWGERY MELSRGNLKQ KHWKEVADIV  120
SSREDYRKVA KTDIQCKNRI DTVKKKYKLE KAKIGAGQGP SKWPFFEKLD HLIGSTAKIN  180
STMSAGVGSA GVGSSNLFSQ KVPMGIPMGV RSLPQLRQHQ QQKQKQPLRR RRHMDSDTSE  240
SESEPDLSPD SADSLPPQSF KRPRVQGMQG GGIGEGSGKG GGSGSGKGNN WGSSLRELTK  300
AILRFGEAYE QAETAKVQQM VEMEKRRMEF TKEMELQRMQ FFMNTQLELS QLKPHRRVGN  360
SNHRSNSNHR SNNNASAANH NNNNSDSSI
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00356DAPTransfer from AT3G14180Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019227077.11e-164PREDICTED: trihelix transcription factor ASIL2
SwissprotQ9LJG81e-103ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A1J6J9B11e-163A0A1J6J9B1_NICAT; Trihelix transcription factor asil2
STRINGXP_009600232.11e-162(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA103321823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.11e-58sequence-specific DNA binding transcription factors