PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03679g05006.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 245aa    MW: 28577.7 Da    PI: 8.137
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03679g05006.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.21.9e-24176234259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                D+++WrKYG K   +s+f +sYY+C    +Cp++++v++s++dp+ v++tY+g+Hnh+
  Peinf101Scf03679g05006.1 176 ADQWRWRKYGMKRTSDSPFNKSYYKCNEVeDCPARRHVQQSTTDPNKVIVTYRGQHNHP 234
                               59************************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-24170234IPR003657WRKY domain
PROSITE profilePS5081123.904170236IPR003657WRKY domain
SuperFamilySSF1182902.62E-21174235IPR003657WRKY domain
SMARTSM007744.1E-24175235IPR003657WRKY domain
PfamPF031061.2E-20177234IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MKPFCRRKVS MSENDWDLWA VVRSCSNFNS SVHDDQRSHD YVDIPVDGNS GNNTETPTIS  60
LEQSDCFGDF SELFTTENKR YFGLDEVCDF SKNANINSRI KPHNPENQTE TIPNTPLLIE  120
HEEKKNKKLL IEHGKRKKKK GSYSIQFSST EEGKIFSYRG KSTERHEILA EKLSEADQWR  180
WRKYGMKRTS DSPFNKSYYK CNEVEDCPAR RHVQQSTTDP NKVIVTYRGQ HNHPLNQDTV  240
RTQMS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-141772351976Probable WRKY transcription factor 4
2lex_A1e-141772351976Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009608028.11e-105PREDICTED: probable WRKY transcription factor 50
TrEMBLA0A1S3ZBK01e-103A0A1S3ZBK0_TOBAC; probable WRKY transcription factor 50
STRINGXP_009608028.11e-104(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA110911323
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.11e-18WRKY family protein