PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf03679g05052.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Dof

Protein Properties

Length: 260aa MW: 28959.7 Da PI: 8.4848

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf03679g05052.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.1	2.2e-39	31	91	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ke++++cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ss Peinf101Scf03679g05052.1 31 KEQSVNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSS 91 7899******************************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-27	25	83	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.3E-33	33	89	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.068	35	89	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	37	73	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence Send to blast
MDTSQWPQGI GVVKTVEPSK TVQERKPRPQ KEQSVNCPRC NSTNTKFCYY NNYSLSQPRY 60 FCKTCRRYWT EGGSLRNVPV GGGSRKNKRS SFNNNNNNSS YSNNSSSSTS SSSKKLPDLT 120 TPKINEPHHD LNFSNISEFM ALPFGHDHNK GLHLMNPNST TSFLDSNTLF SSTTGLPNLH 180 DLKPTLNFSL DHGFEHNGYG NLQGAAQEIT GAKLFFPLDD LKTVSTDPND HHEFEQNKGH 240 HHQVAESNGF WNGMLGGGSS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001312901.1	1e-107	dof zinc finger protein DOF1.8-like
Refseq	XP_009801284.1	1e-107	PREDICTED: dof zinc finger protein DOF1.8-like
TrEMBL	A0A068PXR9	1e-105	A0A068PXR9_TOBAC; Dof zinc finger protein
TrEMBL	A0A1U7YPX6	1e-105	A0A1U7YPX6_NICSY; dof zinc finger protein DOF1.8-like
STRING	XP_009801284.1	1e-106	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.3	6e-46	Dof family protein