PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03731g00039.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 177aa    MW: 20330.3 Da    PI: 4.654
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03731g00039.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.14e-081546132
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                              +g W+++Ed +l++++ ++G g+W++++    
  Peinf101Scf03731g00039.1 15 KGLWSPDEDHKLKNYILEHGHGCWSSVPINAE 46
                              678***********************997766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.04E-6843IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.1E-10844IPR009057Homeodomain-like
PROSITE profilePS500906.0631041IPR017877Myb-like domain
PfamPF002491.5E-61546IPR001005SANT/Myb domain
CDDcd001670.001451841No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MRCKPVESPK KKHRKGLWSP DEDHKLKNYI LEHGHGCWSS VPINAEGSLT DTDQSISQTE  60
FLKEPRESNF QKVLFAEWFS LDQFKSQDFQ NSGNSNHSKN NNFGYNKSDF QDGFIHGLFM  120
SESTYGADIN IPGVLNNETV DDMFQASQFK FENQMSANGF EEFISDEFNI TGDVMYI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009770980.17e-44PREDICTED: transcription factor MYB46-like
RefseqXP_016471228.17e-44PREDICTED: transcription repressor MYB6-like
TrEMBLA0A1S4A3L12e-42A0A1S4A3L1_TOBAC; transcription repressor MYB6-like
TrEMBLA0A1U7W9R42e-42A0A1U7W9R4_NICSY; transcription factor MYB46-like
STRINGXP_009770980.13e-43(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52260.15e-14myb domain protein 19