PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf04526g00021.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family FAR1
Protein Properties Length: 48aa    MW: 5580.51 Da    PI: 11.0391
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf04526g00021.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.12.4e-0710452058
                      FAR1 20 kkskrngeitkrtfvCskegkreeekkktekerrtraet 58
                              ++s++++ i+ ++fvCsk+g+r++++ +++++r +   t
  Peinf101Scf04526g00021.1 10 SRSRKDKLIIGQEFVCSKKGFRSKKSLESNQQRDE---T 45
                              57888999****************99885554443...3 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.9E-5946IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 48 aa     Download sequence    Send to blast
MRIVLVVVIS RSRKDKLIIG QEFVCSKKGF RSKKSLESNQ QRDETREG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019068484.19e-16protein FAR1-RELATED SEQUENCE 5
TrEMBLA0A3Q7ETW62e-14A0A3Q7ETW6_SOLLC; Uncharacterized protein
TrEMBLD5MNY62e-14D5MNY6_SOLLC; Transposon-like element Lyt2-2 DNA