PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf04642g00001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 122aa    MW: 13987.2 Da    PI: 5.9218
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf04642g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.67.2e-1143994298
                              TS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE- CS
                        B3 42 sgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvfr 98
                                 +W++kl  +k   +  + +GW++Fv + gLkegD +vF+l   + ++ + +v++++
  Peinf101Scf04642g00001.1 43 GQIEWNMKL--NKLCAKRRFFDGWSKFVTDTGLKEGDGLVFELLeCNnKNVKSKVQILD 99
                              4479*****..66555555668********************65366677777777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100179.12E-102299No hitNo description
SuperFamilySSF1019362.94E-103691IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.107.7E-103899IPR015300DNA-binding pseudobarrel domain
PfamPF023622.3E-83898IPR003340B3 DNA binding domain
PROSITE profilePS5086310.43346101IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    Send to blast
VVLTDEYIPT KQPQLQQCKE TILPPKILQH LPVTVVPITI RNGQIEWNMK LNKLCAKRRF  60
FDGWSKFVTD TGLKEGDGLV FELLECNNKN VKSKVQILDG SFREELFQEL GEGTSDNRVD  120
IL
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18192154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-06B3 family protein