PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf04822g00006.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bZIP
Protein Properties Length: 446aa    MW: 49358.5 Da    PI: 7.7606
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf04822g00006.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.1e-10169210546
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                               k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L+
  Peinf101Scf04822g00006.1 169 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELQ 210
                               7789************************98888887776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.7E-5165225IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.45167211IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.04E-7169214No hitNo description
CDDcd147081.34E-20169221No hitNo description
PfamPF001702.5E-7169211IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-8170214No hitNo description
PROSITE patternPS000360172187IPR004827Basic-leucine zipper domain
PfamPF141444.9E-34239314IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MSFFELGVGR FGHSKRQRPW GTEENTIHSS HMSDFGVLEQ YLGFRIGDSA NVRSPLFNST  60
SATNPALGLD VTATLSKTLA PSNTTLSTAT PGSQATQLPE ALQPNIVSVP GTHHGNWGES  120
NMAGSSSRTD TLTDMDGNDK NQRFETGQPA GIVASDSSDK SKEKVLDQKT LRRLAQNREA  180
ARKSRLRKKA YVQQLENSRL KLTQLEQELQ QTRQKKVHLS GALAFDVEYG RWVEEQNEHI  240
NELRTAVNSH ASDSELRTLV DTVTAHFDEV FRVKGNAAKA DVFHVLSGMW KTPAERCFMW  300
IGGFRPSELL KLLVNQFEPL TEQQLAGIYN LQQLSHQAED ALSQGMDALQ QSLAETLANG  360
SPAPEGSCGN VANYMGQMAM AMGKLGTLEG FLRQADNLRQ QMLQQLHRIL TTRQSACALL  420
AINEYFSRLR ALSSLWLARP REVATT
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006351371.10.0PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLM1C6P40.0M1C6P4_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000609260.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-129TGACG motif-binding factor 6