PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf04950g00002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Dof
Protein Properties Length: 257aa    MW: 28240.1 Da    PI: 9.9835
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf04950g00002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.91.1e-381473362
                    zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                              e+ lkcprC+stntkfCyynny+lsqPr+fCk+CrryWt+GGalrnvPvGgg+r+n+k+s
  Peinf101Scf04950g00002.1 14 EAGLKCPRCNSTNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGALRNVPVGGGCRRNNKRS 73
                              6779***************************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-32166IPR003851Zinc finger, Dof-type
PfamPF027012.2E-321671IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.8231771IPR003851Zinc finger, Dof-type
PROSITE patternPS0136101955IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MVDRARMQKI PLPEAGLKCP RCNSTNTKFC YYNNYNLSQP RHFCKSCRRY WTRGGALRNV  60
PVGGGCRRNN KRSKSSINNN NNNSSTSKAA GGVQLLGNSI NTSTSASPTR CTMENITNGH  120
QFSQPSTQFT PLMAAFQNFN NYGGFQTPHQ LVHATSNSNG GLSEMGFHNS NNLLPSLAAN  180
FEHTTNLYPF QGDQGTTIEA SNGVNSQVKM EDNRQGMNLN STKQFLGTLE NNQYWSGANS  240
WTGFSGLNNS STTSHLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019235411.16e-98PREDICTED: dof zinc finger protein DOF2.4-like
TrEMBLA0A2G2VP281e-98A0A2G2VP28_CAPBA; Dof zinc finger protein DOF2.4
STRINGXP_009777580.13e-94(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.12e-38DNA binding with one finger 2.4