PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf05008g00002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 454aa    MW: 51186.9 Da    PI: 4.7608
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf05008g00002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM50.85.4e-1611243128
                       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWka 85 
                               +G+rF+P+deelv  yL k + g ++e++++  +vd y   +P+dL  ++   + ++   +k++    ++k+ nr     g+W+ 
  Peinf101Scf05008g00002.1   1 MGMRFRPRDEELV-TYLIKFICGMPFECAHFRCNVDFYANkKPSDLFDELF-PDGDLTDLTKKSD-RGNKKNFNRsLLCGGTWRG 82 
                               59***********.9*************88888999886549****73332.2334444455444.45677888867789***** PP

                       NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                 k k+v+++kg+++g kkt+ f + ++++ ++  W m+ey l
  Peinf101Scf05008g00002.1  83 LDKGKPVKNNKGSVIGSKKTFSFED-KSSSDTRIGWRMKEYCL 124
                               ***********************85.666669*********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.8031151IPR003441NAC domain
PfamPF023651.6E-102124IPR003441NAC domain
SuperFamilySSF1019412.09E-192151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    Send to blast
MGMRFRPRDE ELVTYLIKFI CGMPFECAHF RCNVDFYANK KPSDLFDELF PDGDLTDLTK  60
KSDRGNKKNF NRSLLCGGTW RGLDKGKPVK NNKGSVIGSK KTFSFEDKSS SDTRIGWRMK  120
EYCLSDRIQE ELRRRGQLRH TDMVLCRIKR KVVDQEKEGS CVISSNEESN GISSNNSYKE  180
TVPMEISSSG DSNNIVDEQC HIDYSCVPKV SCLQAGTSSS TILMSNNNTA PSAGLVFTND  240
ECFTKEQIYT GVQDFHNNTG MQVNQNCVDT LAPAGLVFNS DEWFTIDQIF TGVDDGFHTQ  300
TQTIEPLSTD QQELVKNSRE IMTRSKEQDY FECAKANVPS VEESLFELSN LLNRDDYCSS  360
LLSSFIEDSN TTTDEVGFSP ILMGEIWGSV DHHDNLPAQH INQAQIVEPT DPLTNQQELA  420
IAKHGEINHS PIHDIAEYHR ALDSYAAFIL QSTR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13516214
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-10NAC domain containing protein 2