PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf05013g00003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 152aa    MW: 17171.8 Da    PI: 9.1426
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf05013g00003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.000314567123
                              EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                              ++C+ C+k+F++   L  H  +H
  Peinf101Scf05013g00003.1 45 FECKTCNKRFPSFQALGGHRASH 67
                              89**********99999998887 PP
2zf-C2H214.88.5e-0586108123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               ++C++Cg+ Fs    L  H+r+H
  Peinf101Scf05013g00003.1  86 HECSICGMEFSLGQALGGHMRRH 108
                               78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.8684572IPR007087Zinc finger, C2H2
SuperFamilySSF576671.85E-945108No hitNo description
PfamPF139128.2E-134568IPR007087Zinc finger, C2H2
SMARTSM003550.0754567IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002804767IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.605.2E-483108IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS501579.47386108IPR007087Zinc finger, C2H2
PfamPF139121.6E-986110IPR007087Zinc finger, C2H2
SMARTSM003550.06786108IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028088108IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MSAMKRSREE DRQVEAEAMA NCALMLLSKL NNHKTSKNRD DWDDFECKTC NKRFPSFQAL  60
GGHRASHKRL KLLAGVGEQQ AKKKMHECSI CGMEFSLGQA LGGHMRRHRA AIDEMSKAAT  120
KTMMIPVLKK SNSSKRIFCL DLNLSPDDED VD
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0065991e-96AB006599.1 Petunia x hybrida mRNA for ZPT2-12, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009608410.15e-77PREDICTED: zinc finger protein ZAT12-like
SwissprotQ9SLD41e-34ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLO220842e-80O22084_PETHY; ZPT2-12
STRINGXP_009608410.12e-76(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36624150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.16e-37C2H2 family protein