PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf05363g00005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 233aa    MW: 26307.1 Da    PI: 6.4166
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf05363g00005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.22.5e-152366146
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                              rg+WT eEd ll++++ ++G g+W+  a++ g  Rt++++k++w++
  Peinf101Scf05363g00005.1 23 RGPWTVEEDTLLIHYISLHGEGRWNILAKRAG--RTDNEIKNYWRT 66
                              89*****************************8..**********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.73E-141873IPR009057Homeodomain-like
PROSITE profilePS5129421.5021872IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-171974IPR009057Homeodomain-like
SMARTSM007171.2E-132270IPR001005SANT/Myb domain
PfamPF002496.0E-142366IPR001005SANT/Myb domain
CDDcd001671.53E-122566No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MTSLSKSSSS STTTSDDDIG LRRGPWTVEE DTLLIHYISL HGEGRWNILA KRAGRTDNEI  60
KNYWRTRVQK QARHLKIDSN SVAFQELIHR FWIPRLRQKI QGSSASQSTP SLSSQIPQGL  120
RLEKNNSSCS STSSHSSESL NISKAPISEC PNLIPPGDHS DLNSFIKAHF PLDDEGYDME  180
TFSPSTCSFK DVLDYDQMSG EHNRTGDVLA DSFWSMDEFY NYGHPSCFMG FMK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009804370.11e-66PREDICTED: transcription factor MYB57-like
RefseqXP_016509791.11e-66PREDICTED: transcription factor MYB57-like isoform X1
TrEMBLA0A2G3A3772e-66A0A2G3A377_CAPAN; Transcription factor
STRINGXP_009804370.15e-66(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25340.26e-27myb domain protein 116