PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf05858g00011.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 252aa MW: 28198.1 Da PI: 6.2536

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf05858g00011.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.2	3.3e-14	90	137	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ + f L +++P + kKl+K++iL+ ++eY+k+Lq Peinf101Scf05858g00011.1 90 QDHVAAERNRREKMSQLFISLSKIVPGL-----KKLDKSSILRDTIEYMKELQ 137 6799**********************.....9****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	15.815	87	136	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	7.9E-12	90	137	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	7.7E-17	91	150	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	6.67E-17	92	148	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.16E-12	92	141	No hit	No description
SMART	SM00353	7.6E-15	93	142	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence Send to blast
MAYTGFNQED LKQNLSYTIE EKAQKAISCS PLISSSGLLI SFGSSSLNPA VISEEDDIAS 60 MIKYSHLEES AYQESGGNNI IYKRTPLQAQ DHVAAERNRR EKMSQLFISL SKIVPGLKKL 120 DKSSILRDTI EYMKELQEQV KVLEETKKNI PSAWENNDSS SSKENVNCSN QVVGSNIKAR 180 ISNKSVLINI HCNKEDGMVE RVLSQMEQLH LAVHDIRIMP FGLTNLDISI LAEVNSSNLQ 240 LEINVCKSHL KL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009768662.1	3e-89	PREDICTED: transcription factor bHLH18-like
Refseq	XP_016472308.1	3e-89	PREDICTED: transcription factor bHLH18-like
TrEMBL	A0A1S4A6N7	8e-88	A0A1S4A6N7_TOBAC; transcription factor bHLH18-like
TrEMBL	A0A1U7VKZ0	8e-88	A0A1U7VKZ0_NICSY; transcription factor bHLH18-like
STRING	XP_009768662.1	1e-88	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA8864	16	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22760.1	3e-30	bHLH family protein