PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf06135g00002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 228aa    MW: 25425.2 Da    PI: 5.982
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf06135g00002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.81.8e-111444131
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartm 31
                              rg WT+eEd +l  +++q+G+++W++I+++ 
  Peinf101Scf06135g00002.1 14 RGQWTPEEDHKLSSYIAQHGTRNWRLIPKHA 44
                              89***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-13544IPR009057Homeodomain-like
SuperFamilySSF466891.15E-8843IPR009057Homeodomain-like
PROSITE profilePS5129412.422955IPR017930Myb domain
PfamPF002491.3E-91444IPR001005SANT/Myb domain
CDDcd001671.28E-51743No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MGRIPCCEKE NVKRGQWTPE EDHKLSSYIA QHGTRNWRLI PKHAEAALGC FKDEMLHLLT  60
KKRIGFQFQQ FGTSTAPSTS TVKVEDNKEE TIEKIKYGLS RAIKESDMLP SNKHWDPSGG  120
ARSTNLAEPS SGFPHVSDGG FQYNFASLLH EDGEEGSPWN QSLCTGSTCT VGEQQQVHQL  180
HKKLNSNDNC GEDNSDGVKE TRNGSTTMFH SDCILWDISS DDLLNPIV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009602016.16e-64PREDICTED: transcription factor MYB80
TrEMBLA0A1J6I2689e-62A0A1J6I268_NICAT; Transcription factor myb80
STRINGXP_009602016.12e-63(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.12e-24myb domain protein 103