PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf06406g00004.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Dof

Protein Properties

Length: 295aa MW: 32963.4 Da PI: 7.2465

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf06406g00004.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.8	6.5e-40	38	97	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+a+kcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+ s Peinf101Scf06406g00004.1 38 EQAQKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRPS 97 7899*****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	5.0E-30	29	95	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.3E-33	39	95	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.348	41	95	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	43	79	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence Send to blast
MDPSSAQHHH QEMSSQTLES MLVCTKGQEQ EKKPRPDEQA QKCPRCDSTN TKFCYYNNYS 60 LSQPRYFCKS CRRYWTKGGT LRNVPVGGGC RKNKRPSSKR NQDSSVTNSP NYPVSSLCTQ 120 SSYDSSDLSL AFARLQKQAN GHLGIEENDM SMMYNSHGNT SAPSSFLDAL RGGFLETPNG 180 FHHNLYYGNI GNNMGQVENG GILGVNVNEE MGMNYDQEMS STGVTTTATT MTTVKQEMCN 240 MTREGENRIL WGFPWQINGD HVNNMGDFES SNRQSWNGLG NSSWHGHGLL NSPLM

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009598584.1	1e-156	PREDICTED: dof zinc finger protein DOF2.1-like
Refseq	XP_016489685.1	1e-156	PREDICTED: dof zinc finger protein DOF2.1-like
TrEMBL	A0A1S4BLF5	1e-155	A0A1S4BLF5_TOBAC; dof zinc finger protein DOF2.1-like
STRING	XP_009598584.1	1e-156	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28510.1	1e-49	Dof family protein