PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf06583g00014.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

GRAS

Protein Properties

Length: 226aa MW: 25084.1 Da PI: 5.1791

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf06583g00014.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	39.2	1e-12	169	221	3	55
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar 55 +lL +cA+a+++ d++ a + L+ +++ +s +gd+++R+a+yf+ AL+arl + Peinf101Scf06583g00014.1 169 SLLAQCAQAITNYDTRTAYERLKSIRKYSSRYGDATERMAHYFADALEARLGG 221 79************************************************965 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50985	12.338	141	226	IPR005202	Transcription factor GRAS
Pfam	PF03514	3.6E-10	169	221	IPR005202	Transcription factor GRAS

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence Send to blast
MEEEDLENRP CMLQDSLALQ AAEKSFYDAL IEAYPSSSFE VVDSSAIARS QFSLNLRGEK 60 TDATEFIQHN CVNHSMVTQE GVLGEVIDKR RLEGGGKRCS SGDCCDTVEG PISKHLASFY 120 SDPPCCQSDQ PLEEKLAYKP LPGQSRMPKR GRPRANAKPV NTNAVDLWSL LAQCAQAITN 180 YDTRTAYERL KSIRKYSSRY GDATERMAHY FADALEARLG GTGIEL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA17136	4	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46600.1	3e-25	GRAS family protein