PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf08098g00007.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 184aa    MW: 21529 Da    PI: 4.2377
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf08098g00007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.37.1e-08633128
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIa 28
                              +g+W++eEd++l+ ++k++G  +W+  +
  Peinf101Scf08098g00007.1  6 KGPWSPEEDQKLKAYIKKYGIWNWSQMP 33
                              79******************98998766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.428144IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.3E-12338IPR009057Homeodomain-like
SuperFamilySSF466891.79E-8436IPR009057Homeodomain-like
CDDcd001677.41E-5835No hitNo description
Gene3DG3DSA:1.10.10.604.9E-94480IPR009057Homeodomain-like
PROSITE profilePS500906.114684IPR017877Myb-like domain
SuperFamilySSF466899.33E-74980IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MDEIKKGPWS PEEDQKLKAY IKKYGIWNWS QMPKFAVPQL HQQTDMAEIK KGAWSPEEDQ  60
KLKDYIMRYD IWNWRQMPKF AERSADVASP CSSIVTCEEN QMMDVMDFSK TYQDCYNVSS  120
VVDQPAINVE NTAILESFPE TSENIDIANC QLHQFDYSHP CSSLIDGYNF NSLDQFDMNS  180
FWSD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019244663.16e-37PREDICTED: transcription factor WER-like
TrEMBLA0A1J6JBL11e-35A0A1J6JBL1_NICAT; Myb-related protein myb4
STRINGXP_009594710.11e-29(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.12e-09myb domain protein 93