PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf08590g00011.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 149aa    MW: 16618.5 Da    PI: 8.2312
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf08590g00011.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.00015830123
                              EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                              y+C  C++ F++   L  H++ H
  Peinf101Scf08590g00011.1  8 YECVFCKRGFNTAQALGGHMNIH 30
                              99*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.604.7E-4634IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576671.96E-6635No hitNo description
PfamPF139121.1E-5832IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.928835IPR007087Zinc finger, C2H2
PROSITE patternPS0002801030IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MRGIGRSYEC VFCKRGFNTA QALGGHMNIH RKDKARNKPS STHSLLNSKH EIQNSLTGAN  60
LRCYQQVSSY IPTYHEAVTD YSSCLTYFPA SSTSTDVHNR QCLNLFGDNW GMNLSLQFGA  120
AANVIENTIG KNGQENNLDL ELRLGHHDP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009625208.15e-44PREDICTED: transcriptional regulator SUPERMAN-like
TrEMBLA0A1S3XEJ41e-42A0A1S3XEJ4_TOBAC; transcriptional regulator SUPERMAN-like
STRINGXP_009625208.12e-43(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21362152
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.18e-15C2H2 family protein