PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf09248g00006.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

G2-like

Protein Properties

Length: 313aa MW: 34297.2 Da PI: 7.5303

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf09248g00006.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.5	3.1e-33	49	103	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrW++eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Peinf101Scf09248g00006.1 49 KQRLRWNNELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 103 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.254	46	106	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	2.4E-31	48	104	IPR009057	Homeodomain-like
SuperFamily	SSF46689	6.45E-17	48	103	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.7E-25	49	104	IPR006447	Myb domain, plants
Pfam	PF00249	2.0E-8	51	102	IPR001005	SANT/Myb domain
Pfam	PF14379	2.7E-22	135	181	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence Send to blast
MYQPKGVPSP SLVHNNAAVH SHSLDCGGGS MDPISGGNNV NNNASLASKQ RLRWNNELHE 60 RFVDAVAQLG GPDRATPKGV LRVMGVQGLT IYHVKSHLQK YRLAKYLPDS SSDGKQTDKK 120 ESRDTFSSLD GTSGVEITTA LKLQMEVQKR LHEQLEVQKQ LQLRIEAQGK YLKKIIEEQQ 180 RLSGVLSEVP GSGVTAPPTG DNGPESDNRT DPGTPAPTSE SPHVDKPVKA HPPTKSHSMD 240 ESFSSHHEPL TPDSDYQDTS PMESPNSERS SKKQRVGTSA AFMKDNALLP HQIVESSLSR 300 PYQQPHSVFM TRD

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	9e-23	49	106	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	9e-23	49	106	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	9e-23	49	106	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	9e-23	49	106	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016556346.1	0.0	PREDICTED: protein PHR1-LIKE 1
Swissprot	Q9SJW0	1e-116	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A1U8FCD0	0.0	A0A1U8FCD0_CAPAN; protein PHR1-LIKE 1
TrEMBL	A0A2G2ZAZ5	0.0	A0A2G2ZAZ5_CAPAN; Protein PHR1-LIKE 1
STRING	XP_009615786.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2796	24	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-118	G2-like family protein