PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf14655g00001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 281aa    MW: 32719 Da    PI: 5.243
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf14655g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM133.12e-41221482128
                       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknr.atksgyWk 84 
                               p GfrF Ptd+el+++yLkkkv+g++l+  ++i+e+ iy ++P++L  + ++++e++wyfFs r++k+++g+++nr +  +g+Wk
  Peinf101Scf14655g00001.1  22 PLGFRFLPTDDELINDYLKKKVNGEPLPR-NTIQEAFIYLYHPQELCrNDMHKREDKWYFFSGRERKHPKGRKPNRqVKGKGFWK 105
                               89*************************99.88**************7578889999********************6677***** PP

                       NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               atg dkev++ +++ vg kk+L fy+g  +++++++W mheyrl
  Peinf101Scf14655g00001.1 106 ATGADKEVTH-NDQIVGYKKSLDFYEGIPKEAKRSEWKMHEYRL 148
                               **********.999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-4419177IPR003441NAC domain
PROSITE profilePS5100545.30721178IPR003441NAC domain
PfamPF023653.0E-2322148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MENDRENNYQ TLSDEQFFDS IPLGFRFLPT DDELINDYLK KKVNGEPLPR NTIQEAFIYL  60
YHPQELCRND MHKREDKWYF FSGRERKHPK GRKPNRQVKG KGFWKATGAD KEVTHNDQIV  120
GYKKSLDFYE GIPKEAKRSE WKMHEYRLDH KSPPPDANNS VANGNEFGRY VLCAIYMNTA  180
ANNQIKKESN GSEDLTTDDE AMHSVNYDNI QEDPISTEFQ QHENFVGFKN MQESGDQFLQ  240
HEASYNYDLQ NHGGGDVHSL QDFDELSAVV NQATNHQMMG C
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-322017616163NO APICAL MERISTEM PROTEIN
1ut4_B3e-322017616163NO APICAL MERISTEM PROTEIN
1ut7_A3e-322017616163NO APICAL MERISTEM PROTEIN
1ut7_B3e-322017616163NO APICAL MERISTEM PROTEIN
4dul_A3e-322017616163NAC domain-containing protein 19
4dul_B3e-322017616163NAC domain-containing protein 19
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009611016.11e-95PREDICTED: NAC transcription factor 29-like
RefseqXP_016449653.11e-95PREDICTED: NAC transcription factor 29-like
TrEMBLA0A1S3YCC13e-94A0A1S3YCC1_TOBAC; NAC transcription factor 29-like
STRINGXP_009611016.15e-95(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1533968
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.13e-39NAC domain containing protein 25