PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pgl000626

Organism

Picea glauca

Taxonomic ID

3330

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

BES1

Protein Properties

Length: 409aa MW: 42856.5 Da PI: 8.2257

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Pgl#S55349238	PU_unref	Unigene	View CDS
PUT-175a-Picea_glauca-41463	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	199.3	1.2e-61	2	144	2	141
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkss 101 ++ r ptwkErEnnkrRERrRRaiaakiy+GLR++Gnyklpk++DnneVlkALc+eAGw ve+DGttyrkg+ p+e++e++g+sas+sp+ss++ Pgl000626 2 TGSRLPTWKERENNKRRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWQVEEDGTTYRKGCPPPERMETGGASASMSPSSSYH------ 95 57899*************************************************************************************9998...... PP DUF822 102 alaspvesysaspksssfpspssldsislasa...........asllpvls 141 +sp++sy+asp+sssfpsp + ++s as+ l+p+l+ Pgl000626 96 --PSPAASYHASPASSSFPSPGPSYQASPASSsfpspgpsyqdGYLIPWLK 144 ..6666666666666666666544333333322444444444455555555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.4E-60	3	146	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence Send to blast
MTGSRLPTWK ERENNKRRER RRRAIAAKIY SGLRMYGNYK LPKHCDNNEV LKALCNEAGW 60 QVEEDGTTYR KGCPPPERME TGGASASMSP SSSYHPSPAA SYHASPASSS FPSPGPSYQA 120 SPASSSFPSP GPSYQDGYLI PWLKNLGVGG GGGGVGTGGS GRGLPPIGTS NSAPVTPPLS 180 SPTARVPRAM PDWDALVKIS AAAANENSSH CNGTGGAAVV TDDPAAAFCN AVSGWSSQQH 240 HHHYPFLSAP PSPAPHSHSR REPLDLSNAT VDNTKGRWLG GVRVSASASA SMGPSSPTFS 300 LLSPAAQLEH SLGGERSHFF VPADSRLWTP VGSAMSSPCR TPATGGAVVR VAAADEFQFE 360 CGSVKPWQGE RIHEECGGDM DIASDDLELT LGSSKRRAKA DSAATPMFS

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence Send to blast

MTGSRLPTWK ERENNKRRER RRRAIAAKIY SGLRMYGNYK LPKHCDNNEV LKALCNEAGW  60
QVEEDGTTYR KGCPPPERME TGGASASMSP SSSYHPSPAA SYHASPASSS FPSPGPSYQA  120
SPASSSFPSP GPSYQDGYLI PWLKNLGVGG GGGGVGTGGS GRGLPPIGTS NSAPVTPPLS  180
SPTARVPRAM PDWDALVKIS AAAANENSSH CNGTGGAAVV TDDPAAAFCN AVSGWSSQQH  240
HHHYPFLSAP PSPAPHSHSR REPLDLSNAT VDNTKGRWLG GVRVSASASA SMGPSSPTFS  300
LLSPAAQLEH SLGGERSHFF VPADSRLWTP VGSAMSSPCR TPATGGAVVR VAAADEFQFE  360
CGSVKPWQGE RIHEECGGDM DIASDDLELT LGSSKRRAKA DSAATPMFS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-22	5	75	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-22	5	75	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-22	5	75	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-22	5	75	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Pgl.5936	0.0	root\| somatic embryo\| stem

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009352718.1	1e-82	PREDICTED: BES1/BZR1 homolog protein 4-like
TrEMBL	B8LS33	0.0	B8LS33_PICSI; Uncharacterized protein
STRING	XP_009352718.1	4e-82	(Pyrus x bretschneideri)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	2e-33	BES1/BZR1 homolog 4