PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl000827
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family G2-like
Protein Properties Length: 320aa    MW: 35763.3 Da    PI: 7.6841
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55333325PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-12716PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like30.95.9e-101203655
    G2-like 36 mkvkgLtlehvkSHLQkYRl 55
               m+vkgLtl+h+kSHLQkYRl
  Pgl000827  1 MGVKGLTLYHLKSHLQKYRL 20
               99*****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.9E-9121IPR009057Homeodomain-like
PfamPF143791.3E-2362109IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MGVKGLTLYH LKSHLQKYRL GKQPHREVSV DRSNDGGSSD GGHCLSRMAR DSSITPNHKE  60
AMQIADALRA QIEVQRRLHD QLEVQRRLQL RIEAQGKYLQ AILEKAQQTL ASEASTSAGI  120
EATRAKLADL ASKLPTNSVR PNYSAMKVAP LMDMHRQDHG DLELKPHLRD RCSQNQFASH  180
DMEQSLNESE SPIEKKRCRK LFHESNGGNS PTKLRELGLN ASACKTEEEE DEEEEQLIKP  240
TTVERPAATR ALVDERMAML VQSNGLSLIQ ANHEPGLYHP PSMLGNCRKV AEGLDLNRKG  300
EGSVPQQGRE LDLNAYGWGR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1193200EKKRCRKL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.162460.0root| somatic embryo| stem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A3G6JCJ00.0A0A3G6JCJ0_PINTA; Myb family transcription factor PHL3
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.15e-40G2-like family protein