PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl002207
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 501aa    MW: 55727.1 Da    PI: 4.3421
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55335970PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-15994PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.7e-1854104155
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                + y+GVr++  +g+WvAeIr+p   + r  r +lg+f +aeeAa a+++a++ ++g
  Pgl002207  54 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFSSAEEAALAYDQAARVMYG 104
                56*****999.**********8...3.35**********************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.1E-1254104IPR001471AP2/ERF domain
CDDcd000182.27E-3054113No hitNo description
Gene3DG3DSA:3.30.730.101.9E-3055113IPR001471AP2/ERF domain
PROSITE profilePS5103221.45655112IPR001471AP2/ERF domain
SMARTSM003802.8E-3655118IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-2055113IPR016177DNA-binding domain
PRINTSPR003676.3E-105667IPR001471AP2/ERF domain
PRINTSPR003676.3E-107894IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
MAAPXVVETL AKWQELNSQV ESSKDGAKRL RKAPAKGSKK GCMKGKGGPD NGRCNYRGVR  60
QRTWGKWVAE IREPNRGSRL WLGTFSSAEE AALAYDQAAR VMYGSCARLN LPDISSKESS  120
VTSTSTTHVT CQSQECSTSQ QYEVSSEWKD SKSSPLDKYG LSPVPSSQST GIDAVSEAGV  180
EVRNGGRIAD TDQRYGSEIC SGVEAAKSDF PSKVEISAAL PDSTVDLPVK LDTKECTLIP  240
RLVPKDEPQD ADGRNTFDLS QTTLLRFRDE SQSELPSAAV SIALSNPEVQ PISIKAEQNE  300
SAEPLDSFQD IQLQDLDEMF DPDELLKMMN GNENKGELSE ADTQMLSSLY YSSWPQEELT  360
DGDVLPSCDP SSSPTLQYLQ FQSPDYRMLQ DPVVDEGEQL HLDDRNFKGL GQLQQFNLDS  420
FQQSEYQAVK QHVRFDDRQP LHPKVLDDGH FASFPYPYNN QGYQTEDTRT RQVVSPESML  480
TDDLQGMQDS RIFEDIFSSY N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-1955112260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.44750.0needle| stem| vegetative bud
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40350.12e-30ERF family protein