PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl002376
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family GeBP
Protein Properties Length: 482aa    MW: 54826.6 Da    PI: 7.9059
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55344048PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-36018PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57346.41.1e-14182280497
     DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk......aksgkepsfskehdqkifelskkiWg 97 
                ++ ws +De+++  Gli++ +k gk   ++++ +y++vk  ++ ++++sql +K r  ++Kf+   +k      + +++e +f+++h    +el  ++Wg
  Pgl002376 182 SQHWSPKDELAFFNGLISY-SKGGKAFPSNMTSVYDYVKPMLDKQFNNSQLYNKFRWGRNKFHSITAKievnnySFQKNEYKFENPHHGALYELWIQLWG 280
                677****************.677777788***********************************9999776666668999*******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.8E-16183280IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    Send to blast
MLSTDYTTDD ADTNSSSSPS EESGDPFTYQ LKAITSSDSD DDSDDESDYP VPPPKTQKIK  60
RQQQKQRSQL PSAFTNRSAC GDEKTADARR KRRRVHGNDG IPERTTKKKI TEGDKAQKQK  120
FTGIASTSKE EEAPTIGAEA AGAFKRKKIA VENVTTSKDT KKAQKQNVNL AETLNTPSSK  180
ASQHWSPKDE LAFFNGLISY SKGGKAFPSN MTSVYDYVKP MLDKQFNNSQ LYNKFRWGRN  240
KFHSITAKIE VNNYSFQKNE YKFENPHHGA LYELWIQLWG EQDKGGNAHV NHVKHANTVS  300
VDHNREKKKH AREKKKHVEA EACNASLDCK GKKKNHFEVE EEDTHKIISE EEQNRQEEDR  360
EDVPKSKETS LSKRKAGEVQ ISREMYNLFC EERDTALNEL KNGVQKIFNN TNSEIKAMLE  420
XSFPLTLGII FINPTMKYFA RQNNINKECL DIEAYSERLN LLQKECQMHL EDLGAAIGND  480
SS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18993RKRRR
29094KRRRV
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.85040.0needle| stem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8LLG80.0B8LLG8_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.18e-08DNA-binding storekeeper protein-related transcriptional regulator