PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl002713
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 449aa    MW: 50110.9 Da    PI: 8.9115
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55333846PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-1949270PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.93.7e-072472901760
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                A+rsR RK+++i eLe+ v +L+ae ++   e+  l+++   l+
  Pgl002713 247 AQRSRVRKLQYISELERNVSALQAEESEVSAEVAFLNQQRLILT 290
                89*************************99999999888876655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0031236295IPR004827Basic-leucine zipper domain
CDDcd147033.70E-15237286No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-7247287No hitNo description
SuperFamilySSF579592.06E-5247289No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MANQMKGKTQ PVNWSYTPRQ PHLPPKSPFP SMGPAFVDYG PSPFKGQRSS PHAREGYRQH  60
QRTSSESILI EEQPSWLDDL LNEPETPVKK GSHRRSASDS VTFLEVPSTI SRIENIAEAE  120
FDRSVKSLFS RTSSDADWID QEYRTSNSYQ AKSKKPPIRS WDASVNLGTT YKGGSNNARE  180
SRKIANLGTS LLTQDSESAT ISVVKREEQQ ECDGHDAASS GLEGRDTTHF KLDDPDVDQK  240
RTKQHFAQRS RVRKLQYISE LERNVSALQA EESEVSAEVA FLNQQRLILT LENQALKQRI  300
NGLGQEKLIK DAEYELLKKE SHRLKLLYQQ QQIQQHSSLH PSHMHQLPTS LDFDLQQLQF  360
SKLSLGTVKP VDSKLTQSNS VFGLAKDMGG SSVVDGNDGG TTHRNGRSEV SKGNIPSSCM  420
IAGTSKKLDG RRMMTGGGLV PVDFMLQNS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.213530.0needle| somatic embryo| stem| vegetative bud
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.22e-52bZIP family protein