PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl004347
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family G2-like
Protein Properties Length: 343aa    MW: 38397 Da    PI: 5.1707
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55340206PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-33809PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.57.5e-34112166155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                kprlrWtpeLHe+Fvea+++LGG+e+AtPk +l+lm+v+gLt++hvkSHLQkYR+
  Pgl004347 112 KPRLRWTPELHENFVEAINKLGGAERATPKGVLKLMNVEGLTIYHVKSHLQKYRI 166
                79****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.455109169IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.6E-32109167IPR009057Homeodomain-like
SuperFamilySSF466892.87E-18110166IPR009057Homeodomain-like
TIGRFAMsTIGR015574.0E-25112167IPR006447Myb domain, plants
PfamPF002491.0E-9114165IPR001005SANT/Myb domain
PfamPF143791.4E-23196242IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
XEHPLQELFN FSEELSEYSQ RSQEKPANAR NVGQEQSKQS DWPLWTEHLV SDDLSDLLVG  60
DPCINTAYQT AKSSATESTS HQLQSHQQFL PPSGGIHLPA NSPASGAGAS NKPRLRWTPE  120
LHENFVEAIN KLGGAERATP KGVLKLMNVE GLTIYHVKSH LQKYRIAKYI SDYTDGNANR  180
KRNVDDDISL DLKTGMQITE ALRLQMEVQK QLHEQLETQR NLQLRIEEHG RYLQKMFEEQ  240
TKAGNLFKSH GPSAAGCSDP SPEETSSKLS KEESNAGHSE PNLDTSEKEN SVSEKLPVSG  300
TYGDGQQLAW DHHESTPDLE FQLESPLSKS KRIRLDGDIQ DVD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-28112169259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-28112169259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A8e-28112169158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B8e-28112169158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C8e-28112169158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D8e-28112169158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-28112169259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-28112169259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-28112169259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-28112169259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-28112169259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-28112169259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.144990.0somatic embryo
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR2 and PHR3 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250|UniProtKB:Q10LZ1}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011623361.15e-81protein PHOSPHATE STARVATION RESPONSE 1
SwissprotB8ANX98e-64PHR1_ORYSI; Protein PHOSPHATE STARVATION RESPONSE 1
TrEMBLB8LPK90.0B8LPK9_PICSI; Uncharacterized protein
STRINGERN060375e-80(Amborella trichopoda)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.12e-58phosphate starvation response 1