PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl004973
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 309aa    MW: 34887.9 Da    PI: 5.922
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55335346PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-9535PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.81.1e-17191241255
        AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                +++GVr+++ +g+++AeIrd       +  r++lg+f+tae+Aa a+++a+ k++g
  Pgl004973 191 HFRGVRRRP-WGKFAAEIRD----SarQGSRVWLGTFDTAEDAAFAYDRAAYKMRG 241
                69*******.**********....33334*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.1E-30190249IPR001471AP2/ERF domain
CDDcd000187.60E-28191249No hitNo description
PfamPF008475.2E-12191241IPR001471AP2/ERF domain
PROSITE profilePS5103223.182191249IPR001471AP2/ERF domain
SMARTSM003804.9E-37191255IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-22191251IPR016177DNA-binding domain
PRINTSPR003673.5E-10192203IPR001471AP2/ERF domain
PRINTSPR003673.5E-10215231IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MNVLDQIRQH LLGESDGSPS FCTGSPAESC LTENYASSNS WNASDELDSG FVQSALVSDF  60
VEEEQTATEN QPCGGTRFSR PVLSITVPRR ECFEWERRSV SWGVDSRNFV TACCPASIRR  120
CLSCEWGKLP LDENDSEDMV LLGVLKEATQ KGWTPLTPKE TKNADVRKQI NPRQETGHKL  180
SEKEKKSGER HFRGVRRRPW GKFAAEIRDS ARQGSRVWLG TFDTAEDAAF AYDRAAYKMR  240
GTKALLNFPL DVVSKSMDTL REDESCCRKR KLNEQAVRGE EKRPKSEQCG VDSEESIVVE  300
DGEQKRFAR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-30190254468ATERF1
3gcc_A1e-30190254468ATERF1
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.176180.0stem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026415277.11e-50ethylene-responsive transcription factor 1A-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-35ethylene responsive element binding factor 1