PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl005079
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family G2-like
Protein Properties Length: 304aa    MW: 32320.4 Da    PI: 6.0958
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55344743PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-49051PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like506.5e-1610382755
    G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
               AtPk +l++m+v+gLt++hvkSHLQkYRl
  Pgl005079 10 ATPKGVLRVMGVQGLTIYHVKSHLQKYRL 38
               9***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015575.2E-111039IPR006447Myb domain, plants
SuperFamilySSF466896.27E-61039IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.5E-151039IPR009057Homeodomain-like
PfamPF143793.5E-2370116IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
XITEAIEPGA TPKGVLRVMG VQGLTIYHVK SHLQKYRLSK YLPDSMGDGL KSEKKESTDI  60
LSNLDAASGV QISEALQMQM EVQKRLHEQI EVQRQLQLRI EAQGKYLQKI IEEQQRLSGA  120
LKDGTTSASF SLPACTGQPE QASDLKPDPS NLIPMPVASQ DGGGTGGASS SVAKHSLNCL  180
SHDESPSFSS QQGPPSPDSL GDDESSSGAN SPLESPRSGK PPQKKPRLDI MSASSDQQXS  240
AAALPTSPTS QPRNQLLSQT KHAVSSEMSA SAHMLQQSSR DAFYPFNSAS SMTDLQEGSG  300
HASG
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.81600.0cone
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021666823.16e-66myb family transcription factor PHL7-like isoform X2
SwissprotQ9SJW01e-59PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLD5ACF50.0D5ACF5_PICSI; Uncharacterized protein
STRINGXP_008384340.19e-66(Malus domestica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-61G2-like family protein