PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl005294
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family Trihelix
Protein Properties Length: 295aa    MW: 31984.2 Da    PI: 7.6983
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55351652PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-39333PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix36.61.2e-1130117286
   trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                W  + v +L+e + ++  +++ g lk ++W+++ + +     ++    ++ kqC++k enl++ryk +k+++ +r   ss ++++f++l+
  Pgl005294  30 WHPSTVSKLLESYGDKCATIK-GYLKIKDWDDIVRTVnahcdASNIAPKTMKQCRDKVENLKRRYKLEKRRAANR-GLSSVHWSFFHKLD 117
                99999********99998886.55999******9999998887888899************************98.788889******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.8E-1428119No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MGSVSEDEDE YGKGGAVVGG SASSVSRCEW HPSTVSKLLE SYGDKCATIK GYLKIKDWDD  60
IVRTVNAHCD ASNIAPKTMK QCRDKVENLK RRYKLEKRRA ANRGLSSVHW SFFHKLDEIM  120
AMATATATGS DKATSLLEAC QSSFELNQGV DCELPEGFAG ESMPPPPLMS MSMSMSDMVL  180
SVFAGADRGK GLVDNTGGVD CSLDDILNNV CSYSSKNNRR LDFQDSSSPE KQPPPKRKKS  240
SASNSPSVSK KRKGLGISGL VLEDDLNPVT DTIFWFYKMS IDGVALVRKL AGNAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1236252RKKSSASNSPSVSKKRK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.261640.0cone| root
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10030.13e-18Trihelix family protein