PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl005898
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family Trihelix
Protein Properties Length: 266aa    MW: 30465.2 Da    PI: 6.06
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55337185PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-25872PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix41.53.6e-1327812783
   trihelix 27 kkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83
                  +W+ +s+++++  ++r++ qC++kwe l  +ykkike+e++  ++++s +++ +
  Pgl005898 27 VSDKWSIISNRCAASHVQRTAGQCRKKWELLISDYKKIKEWERQ--CGVESYWSLSH 81
               4679***************************************8..99999998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.841658IPR017877Myb-like domain
PfamPF138371.0E-82978No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MLVLVREKWA VENELQLSPS KSQFTGVSDK WSIISNRCAA SHVQRTAGQC RKKWELLISD  60
YKKIKEWERQ CGVESYWSLS HSAKREHKLP FYLERELFDV MDANLDKTPT ACPDATFDSM  120
DVAADSLFTA NDESQDDMVK MQDPTASGSG NEPLDSTIRH KRRRCSSEDE RDHGIISVLR  180
ENCQNIQAVI RETTQAQMCS SQLDRDMYWK GIEVNKQVQL QTSELDRELR RKQGQDLIDV  240
LGGLVNAVNR LVDTIQNKNS RQLNGP
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.257170.0stem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NXN90.0A9NXN9_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.13e-23Trihelix family protein