PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl005906
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 266aa    MW: 28932.3 Da    PI: 7.324
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S40883478PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-40001PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.2e-172676256
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
               +y+GVr ++ +gr++AeI dp +   +kr +lg+f+t eeAa+ +++ +++++g+
  Pgl005906 26 HYRGVRKRP-WGRYAAEITDPLT---KKRKWLGTFDTGEEAAREYDKVARNMRGA 76
               6********.**********743...4*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.9E-302689IPR001471AP2/ERF domain
CDDcd000188.52E-282684No hitNo description
PfamPF008475.7E-122675IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-272683IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-192684IPR016177DNA-binding domain
PROSITE profilePS5103221.0872683IPR001471AP2/ERF domain
PRINTSPR003673.7E-92738IPR001471AP2/ERF domain
PRINTSPR003673.7E-94965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MAAHRDRNDD SNSEIFGDAN AAKEVHYRGV RKRPWGRYAA EITDPLTKKR KWLGTFDTGE  60
EAAREYDKVA RNMRGANAKT NFPAPSPHLE NLVHNQSSTT TVATSLPAPP LSSTPANHRK  120
IKNKTSASSG VAEQMEPWTC VYVNEGAADH DMNRSTKTTI PFPHNLVDYA TLLQQLPMGV  180
SLLGEIVGSQ MMKRHGGHDW LGVGLVNSFL PAAAQTSACE SSSSSGLVDT QLSPPPPTKK  240
KATLRSIDLN EDDEDERSPS LTLSLG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-182283163ATERF1
3gcc_A4e-182283163ATERF1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13050RKRPWGRYAAEITDPLTKKRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022739118.14e-31ethylene-responsive transcription factor 9-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.12e-29ethylene responsive element binding factor 4