PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl006983
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 217aa    MW: 24105.1 Da    PI: 8.9481
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-175a-Picea_glauca-17670PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.34e-1496137445
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                ++++rr+ +NRe+ArrsR+RK+  ++eL+  v+ L aeN + 
  Pgl006983  96 VRKQRRMLSNRESARRSRLRKQHHLDELRAQVAHLRAENGEI 137
                689************************************865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.5E-1493157IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.10595151IPR004827Basic-leucine zipper domain
PfamPF001704.1E-1196141IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.75E-1296151No hitNo description
Gene3DG3DSA:1.20.5.1709.7E-1097169No hitNo description
CDDcd147029.82E-2198149No hitNo description
PROSITE patternPS000360100115IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MDIPKNFVVP IRPAQFSREI YDMGSAQYNN MNIAAHLNAS GAKTAVPTMK SMCVSVDKRC  60
PTQDSLYSPG SNGEGISQSR SISASDEAEV QQVIDVRKQR RMLSNRESAR RSRLRKQHHL  120
DELRAQVAHL RAENGEIVDK FNIASRHYAH IIEENCLLRS QAQELSRKLQ ILQHTINAQS  180
HGGFKTTGIE TGNCSAAHLS LESGTIANSF ISSDLLF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109115RRSRLRK
2109116RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.35361e-141root| stem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLH9VT374e-61H9VT37_PINTA; Uncharacterized protein (Fragment)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.14e-28basic leucine-zipper 42