PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl007123
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 212aa    MW: 23907.3 Da    PI: 8.2062
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55351171PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-5310PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.52.5e-16246755
        AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               r ++ +gr++AeIrdp +   ++r++lg+f+taeeAa+a++ a+++l+g
  Pgl007123  2 RKRP-WGRFAAEIRDPMK---KTRVWLGTFDTAEEAARAYDSAARALRG 46
               5677.**********843...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.56154IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-19254IPR016177DNA-binding domain
CDDcd000182.03E-29256No hitNo description
SMARTSM003801.4E-30260IPR001471AP2/ERF domain
PfamPF008473.6E-10246IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.4E-28254IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
XRKRPWGRFA AEIRDPMKKT RVWLGTFDTA EEAARAYDSA ARALRGSKAK TNFAIVPPCD  60
DRSTSLSSTV ESWSSPKNNT NNNTRRSLSL NKTEDIRHKI DLNIAQEEFG RKSASPYLED  120
KIPNISKKQK IFKRSCAPDR AAEAYNWSRQ QYPQRGLDPN ACHSDCDSSS SVVDDDEVGT  180
SSLRPQGIRL LPDLNLPPCD EEEDFSSMLL HL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-17255761ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A3e-172531971Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0C9QXH76e-78A0A0C9QXH7_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_1413_2210 transcribed RNA sequence
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.14e-18ethylene response factor 8