PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl007289
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 203aa    MW: 22685.1 Da    PI: 7.4372
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S40840783PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-2562PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.11.9e-174089255
        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
               +++GVr++  +g+WvAeIr        +  r++lg++ tae+Aa+a++aa  +l+g
  Pgl007289 40 RFRGVRRRT-WGKWVAEIRMlR-----CrSRVWLGSYRTAEQAARAYDAASFCLRG 89
               69****877.**********76.....56*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.6E-124089IPR001471AP2/ERF domain
SuperFamilySSF541714.9E-204098IPR016177DNA-binding domain
SMARTSM003802.5E-3340103IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.5E-284099IPR001471AP2/ERF domain
PROSITE profilePS5103221.9574097IPR001471AP2/ERF domain
PRINTSPR003677.5E-104152IPR001471AP2/ERF domain
CDDcd000184.75E-224899No hitNo description
PRINTSPR003677.5E-106379IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
XLSQYLYPCS GYLAMKKEVD QAIMVSRSRE AEAEELRSRR FRGVRRRTWG KWVAEIRMLR  60
CRSRVWLGSY RTAEQAARAY DAASFCLRGP AAFLNFPESP PAEFLPYPLR PLHDIHLSPQ  120
QIRTIAANYA TMTPSSTSIS TSTSGLPPQQ SNLMDNSALE EAGGEGSASV STHVDSTKSA  180
PRNMIFPNLN DTLDEDSEDS SER
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-1840971472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.126930.0root
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5A8A71e-135D5A8A7_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.11e-23ERF family protein