PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl007843
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 172aa    MW: 19295.6 Da    PI: 10.0403
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55333470PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-4218PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.61.3e-1393149157
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                +ke kr +r+ +NR++A+  R+RKka++ eLe+k+ eL+++N++L +++++l++e  
  Pgl007843  93 DKEHKRLKRLLRNRVSAQQARERKKAYLNELETKANELQQKNSELEERVSTLQNENF 149
                5899*************************************************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-1593157IPR004827Basic-leucine zipper domain
PfamPF001709.8E-1294153IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.72595158IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-1397155No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-1697157No hitNo description
CDDcd147041.51E-1798148No hitNo description
PROSITE patternPS000360100115IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MVRRSLKYKM QATAPDFSGS ATGDKLITSS SGDPHEEAMN ECVNESDDDI RRVPEMGVQT  60
GFVVHSDLAV KTESERASAS GGSQRRRGRT PADKEHKRLK RLLRNRVSAQ QARERKKAYL  120
NELETKANEL QQKNSELEER VSTLQNENFM LRQVLKNMTA KNKGGGFVEA EG
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.150770.0needle| stem| vegetative bud
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269|PubMed:15178762}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021758181.19e-49transcription factor HY5-like
SwissprotQ9SM503e-44HY5_SOLLC; Transcription factor HY5
TrEMBLA9NZF51e-116A9NZF5_PICSI; Uncharacterized protein
STRINGXP_010670652.16e-47(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.12e-35bZIP family protein
Publications ? help Back to Top
  1. Wang F, et al.
    Light Signaling-Dependent Regulation of Photoinhibition and Photoprotection in Tomato.
    Plant Physiol., 2018. 176(2): p. 1311-1326
    [PMID:29146776]
  2. Liu CC, et al.
    The bZip transcription factor HY5 mediates CRY1a-induced anthocyanin biosynthesis in tomato.
    Plant Cell Environ., 2018. 41(8): p. 1762-1775
    [PMID:29566255]