PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl007969
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ZF-HD
Protein Properties Length: 163aa    MW: 18079.4 Da    PI: 5.7478
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55344410PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-12056PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1049.7e-3396153260
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  ++vrY eC+kNhAas+Gg+avDGCgEfm+s geegtaaalkCaAC+CHR+FHRreve+e
    Pgl007969  96 NAVRYAECRKNHAASIGGYAVDGCGEFMAS-GEEGTAAALKCAACNCHRSFHRREVENE 153
                  579**************************9.999*********************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257745.0E-2396160IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047702.6E-3098150IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015661.5E-2899150IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152326.592100149IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MNKESEEVYL SIPNPSGCSL SNIDSLRLQR YTEVKEGFLT DELKSIFSDL RSVILVTNPP  60
EIQIQAQLIR SVEKMSPSKV QDIEATPRGA DASFMNAVRY AECRKNHAAS IGGYAVDGCG  120
EFMASGEEGT AAALKCAACN CHRSFHRREV ENETLRECQR TRT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NSF75e-53A9NSF7_PICSI; Uncharacterized protein
STRINGXP_008792497.17e-31(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.17e-30mini zinc finger 2